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CAZyme Information: EFQ35384.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Colletotrichum graminicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Glomerellaceae; Colletotrichum; Colletotrichum graminicola | |||||||||||
| CAZyme ID | EFQ35384.1 | |||||||||||
| CAZy Family | GT15 | |||||||||||
| CAZyme Description | Glycosyl hydrolase family 28 [Source:UniProtKB/TrEMBL;Acc:E3QWZ6] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:14 | 3.1.1.11:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 42 | 360 | 3e-66 | 0.9292307692307692 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.73e-104 | 43 | 370 | 1 | 319 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 227721 | Pgu1 | 4.56e-21 | 87 | 292 | 190 | 400 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215426 | PLN02793 | 1.48e-20 | 184 | 346 | 222 | 380 | Probable polygalacturonase |
| 177865 | PLN02218 | 2.04e-19 | 96 | 328 | 158 | 382 | polygalacturonase ADPG |
| 215540 | PLN03010 | 1.11e-16 | 188 | 355 | 206 | 375 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.51e-209 | 1 | 372 | 34 | 421 | |
| 5.24e-165 | 8 | 372 | 6 | 371 | |
| 2.12e-164 | 8 | 372 | 6 | 371 | |
| 2.12e-164 | 8 | 372 | 6 | 371 | |
| 2.12e-164 | 8 | 372 | 6 | 371 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.01e-161 | 28 | 372 | 3 | 349 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 1.01e-88 | 21 | 369 | 1 | 341 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.43e-88 | 21 | 369 | 1 | 341 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 3.56e-87 | 26 | 369 | 1 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.11e-86 | 26 | 367 | 1 | 333 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.23e-164 | 19 | 370 | 112 | 469 | Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1 |
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| 8.41e-160 | 28 | 372 | 27 | 373 | Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1 |
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| 9.61e-154 | 28 | 371 | 154 | 495 | Probable endopolygalacturonase D OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaD PE=3 SV=1 |
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| 9.61e-154 | 28 | 371 | 154 | 495 | Endopolygalacturonase D OS=Aspergillus niger OX=5061 GN=pgaD PE=3 SV=1 |
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| 1.00e-152 | 28 | 371 | 151 | 492 | Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000223 | 0.999751 | CS pos: 20-21. Pr: 0.9659 |