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CAZyme Information: EFQ31106.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Colletotrichum graminicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Glomerellaceae; Colletotrichum; Colletotrichum graminicola | |||||||||||
| CAZyme ID | EFQ31106.1 | |||||||||||
| CAZy Family | GH152 | |||||||||||
| CAZyme Description | Amb_all domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QJR8] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 4.2.2.10:3 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 113 | 302 | 3.6e-84 | 0.983957219251337 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 214765 | Amb_all | 5.47e-38 | 114 | 304 | 5 | 189 | Amb_all domain. |
| 226384 | PelB | 9.99e-17 | 106 | 330 | 81 | 309 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 366158 | Pec_lyase_C | 1.28e-16 | 104 | 301 | 11 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 2.39e-273 | 1 | 395 | 1 | 395 | |
| 2.09e-210 | 1 | 390 | 1 | 388 | |
| 2.89e-195 | 15 | 390 | 15 | 391 | |
| 1.56e-189 | 12 | 390 | 14 | 390 | |
| 2.72e-189 | 12 | 390 | 13 | 386 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.53e-88 | 18 | 390 | 1 | 359 | Pectin Lyase B [Aspergillus niger] |
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| 2.83e-81 | 20 | 389 | 3 | 357 | Pectin Lyase A [Aspergillus niger] |
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| 8.91e-80 | 20 | 389 | 3 | 357 | Pectin Lyase A [Aspergillus niger],1IDJ_B Pectin Lyase A [Aspergillus niger] |
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| 8.34e-09 | 104 | 285 | 57 | 231 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
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| 4.77e-08 | 99 | 191 | 59 | 163 | Chain A, Pectate lyase [Dickeya chrysanthemi],1JRG_B Chain B, Pectate lyase [Dickeya chrysanthemi],1JTA_A Chain A, pectate lyase A [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.23e-200 | 13 | 390 | 14 | 387 | Probable pectin lyase F-1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-1 PE=3 SV=1 |
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| 1.56e-195 | 12 | 390 | 10 | 385 | Probable pectin lyase E OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pelE PE=3 SV=1 |
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| 8.99e-195 | 12 | 390 | 10 | 385 | Probable pectin lyase F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pelF PE=3 SV=1 |
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| 2.30e-107 | 6 | 390 | 8 | 379 | Probable pectin lyase F-2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pelF-2 PE=3 SV=1 |
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| 4.60e-106 | 13 | 390 | 16 | 382 | Probable pectin lyase F OS=Aspergillus niger OX=5061 GN=pelF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000219 | 0.999734 | CS pos: 18-19. Pr: 0.9788 |