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CAZyme Information: EFQ28955.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Colletotrichum graminicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Glomerellaceae; Colletotrichum; Colletotrichum graminicola | |||||||||||
| CAZyme ID | EFQ28955.1 | |||||||||||
| CAZy Family | CE4 | |||||||||||
| CAZyme Description | GMC_OxRdtase_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:E3QDL7] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 38 | 660 | 3.1e-96 | 0.9929577464788732 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 1.27e-71 | 53 | 661 | 20 | 533 | choline dehydrogenase; Validated |
| 225186 | BetA | 3.58e-57 | 53 | 661 | 22 | 535 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 1.85e-31 | 516 | 655 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 215420 | PLN02785 | 3.94e-21 | 291 | 641 | 226 | 558 | Protein HOTHEAD |
| 366272 | GMC_oxred_N | 1.20e-10 | 139 | 412 | 19 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 662 | 1 | 662 | |
| 8.65e-293 | 26 | 660 | 36 | 674 | |
| 8.65e-293 | 26 | 660 | 36 | 674 | |
| 8.65e-293 | 26 | 660 | 36 | 674 | |
| 8.77e-293 | 32 | 660 | 23 | 655 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.92e-44 | 32 | 661 | 1 | 562 | Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 9.05e-44 | 39 | 661 | 8 | 562 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 9.05e-44 | 39 | 661 | 8 | 562 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
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| 9.05e-44 | 39 | 661 | 8 | 562 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 1.12e-43 | 39 | 661 | 24 | 578 | Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.77e-45 | 39 | 661 | 7 | 537 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=betA PE=3 SV=1 |
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| 3.77e-45 | 39 | 661 | 7 | 537 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000) OX=223283 GN=betA PE=3 SV=1 |
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| 9.49e-45 | 39 | 661 | 5 | 535 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=betA PE=3 SV=1 |
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| 1.32e-44 | 39 | 661 | 7 | 537 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1 |
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| 1.15e-43 | 39 | 661 | 5 | 535 | Oxygen-dependent choline dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.001417 | 0.998546 | CS pos: 21-22. Pr: 0.9649 |