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CAZyme Information: EFQ26582.1

You are here: Home > Sequence: EFQ26582.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Colletotrichum graminicola
Lineage Ascomycota; Sordariomycetes; ; Glomerellaceae; Colletotrichum; Colletotrichum graminicola
CAZyme ID EFQ26582.1
CAZy Family AA7
CAZyme Description Glycosyl hydrolase family 28 [Source:UniProtKB/TrEMBL;Acc:E3Q6U4]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
313 33651.55 6.4569
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgraminicolaM1-001 12400 645133 380 12020
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 5 294 7.2e-69 0.7723076923076924

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 6.65e-40 4 297 48 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
215426 PLN02793 2.09e-29 15 290 149 406
Probable polygalacturonase
178580 PLN03003 4.13e-28 15 293 119 375
Probable polygalacturonase At3g15720
215120 PLN02188 4.42e-27 80 283 194 379
polygalacturonase/glycoside hydrolase family protein
215540 PLN03010 1.50e-26 14 294 144 390
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.37e-203 1 308 130 437
3.03e-161 1 304 138 441
2.15e-157 1 304 152 455
1.43e-156 1 305 146 450
1.43e-156 1 305 146 450

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.26e-56 15 297 109 378
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
8.09e-26 3 297 72 342
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
1.12e-25 3 297 72 342
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
2.62e-25 3 297 64 334
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
2.50e-23 3 296 68 336
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.95e-127 1 302 133 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2
1.95e-127 1 302 133 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2
4.18e-127 1 302 133 431
Probable exopolygalacturonase X OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=pgaX PE=3 SV=1
9.04e-126 1 302 133 431
Probable exopolygalacturonase X OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaX PE=3 SV=2
5.72e-125 1 308 138 442
Exopolygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGX1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000064 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in EFQ26582.1.