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CAZyme Information: EFQ25656.1

You are here: Home > Sequence: EFQ25656.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Colletotrichum graminicola
Lineage Ascomycota; Sordariomycetes; ; Glomerellaceae; Colletotrichum; Colletotrichum graminicola
CAZyme ID EFQ25656.1
CAZy Family AA2
CAZyme Description Glycosyl hydrolase family 28 [Source:UniProtKB/TrEMBL;Acc:E3Q3Q4]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
450 GG697332|CGC2 48936.56 4.3149
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgraminicolaM1-001 12400 645133 380 12020
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EFQ25656.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 90 432 2.3e-61 0.9107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 4.76e-27 139 432 48 315
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 2.01e-18 142 443 113 391
Probable polygalacturonase At3g15720
215120 PLN02188 4.08e-17 150 432 128 390
polygalacturonase/glycoside hydrolase family protein
177865 PLN02218 2.94e-16 64 416 82 409
polygalacturonase ADPG
215540 PLN03010 1.57e-14 64 415 61 374
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.17e-175 42 442 38 437
7.08e-175 42 442 40 439
3.93e-174 35 440 34 438
1.33e-172 42 442 40 439
4.70e-171 38 442 37 440

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.34e-31 37 440 2 382
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
3.07e-11 153 415 83 321
Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]
1.83e-08 153 420 80 336
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.69e-120 37 440 17 415
Alpha-L-rhamnosidase rgxB OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxB PE=2 SV=2
7.57e-75 54 440 32 436
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rgxA PE=2 SV=2
1.07e-74 54 415 32 413
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus niger OX=5061 GN=rgxA PE=2 SV=1
3.15e-73 52 440 29 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rgxA PE=3 SV=1
3.15e-73 52 440 29 435
Putative galacturan 1,4-alpha-galacturonidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rgxA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000391 0.999569 CS pos: 17-18. Pr: 0.9769

TMHMM  Annotations      help

There is no transmembrane helices in EFQ25656.1.