logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EEU45638.1

You are here: Home > Sequence: EEU45638.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Fusarium vanettenii
Lineage Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium vanettenii
CAZyme ID EEU45638.1
CAZy Family GT2
CAZyme Description Pectate lyase C [Source:UniProtKB/TrEMBL;Acc:C7YSH3]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
398 GG698899|CGC10 41939.69 6.4952
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Fvanettenii77134 15708 660122 0 15708
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EEU45638.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 54 229 5.4e-51 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
408654 TSP3_bac 3.56e-04 355 375 1 21
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.62e-278 1 398 1 416
1.17e-223 1 398 1 414
8.92e-223 1 398 1 413
1.27e-222 1 398 1 413
2.13e-215 1 398 1 408

PDB Hits      help

EEU45638.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.24e-179 1 398 1 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
8.24e-178 1 398 1 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
1.08e-173 1 398 1 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
2.04e-171 1 398 1 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
4.11e-171 1 398 1 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000289 0.999702 CS pos: 18-19. Pr: 0.9756

TMHMM  Annotations      help

There is no transmembrane helices in EEU45638.1.