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CAZyme Information: EEU37136.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium vanettenii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium vanettenii | |||||||||||
| CAZyme ID | EEU37136.1 | |||||||||||
| CAZy Family | GH1 | |||||||||||
| CAZyme Description | Rhamnogalacturonase A [Source:UniProtKB/TrEMBL;Acc:C7ZFX9] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 66 | 375 | 1e-48 | 0.9661538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215426 | PLN02793 | 3.14e-21 | 5 | 379 | 20 | 414 | Probable polygalacturonase |
| 177865 | PLN02218 | 1.61e-20 | 37 | 374 | 64 | 418 | polygalacturonase ADPG |
| 215540 | PLN03010 | 2.04e-18 | 42 | 376 | 48 | 391 | polygalacturonase |
| 178580 | PLN03003 | 2.60e-15 | 42 | 392 | 25 | 393 | Probable polygalacturonase At3g15720 |
| 395231 | Glyco_hydro_28 | 1.27e-14 | 148 | 374 | 85 | 315 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 596 | 1 | 601 | |
| 2.61e-271 | 1 | 469 | 1 | 456 | |
| 3.90e-268 | 1 | 469 | 1 | 456 | |
| 3.90e-268 | 1 | 469 | 1 | 456 | |
| 3.90e-268 | 1 | 469 | 1 | 456 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3.83e-184 | 21 | 439 | 1 | 419 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 8.92e-16 | 48 | 366 | 23 | 367 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.14e-196 | 5 | 469 | 2 | 468 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 4.03e-189 | 21 | 438 | 19 | 437 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
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| 3.41e-188 | 3 | 459 | 2 | 459 | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1 |
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| 9.72e-188 | 3 | 459 | 2 | 459 | Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1 |
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| 7.54e-187 | 21 | 438 | 19 | 437 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000282 | 0.999673 | CS pos: 18-19. Pr: 0.9827 |