logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: EDK45110.1

You are here: Home > Sequence: EDK45110.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lodderomyces elongisporus
Lineage Ascomycota; Saccharomycetes; ; Debaryomycetaceae; Lodderomyces; Lodderomyces elongisporus
CAZyme ID EDK45110.1
CAZy Family GT20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
704 CH981527|CGC11 77589.75 7.3228
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LelongisporusNRRLYB-4239 5908 379508 109 5799
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EDK45110.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 193 692 9.2e-47 0.9598540145985401

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 2.21e-92 241 455 1 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 1.92e-27 192 691 6 530
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 8.05e-23 536 686 1 139
GMC oxidoreductase. This domain found associated with pfam00732.
404351 NAD_binding_8 0.002 198 225 1 28
NAD(P)-binding Rossmann-like domain.
395718 FAD_binding_2 0.003 195 228 1 34
FAD binding domain. This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.20e-116 55 698 90 734
1.12e-08 195 694 231 761
1.17e-08 195 451 25 297
4.42e-08 195 694 234 764
4.42e-08 195 694 234 764

PDB Hits      help

EDK45110.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.16e-79 195 700 234 742
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1
9.32e-77 110 701 98 725
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2
1.47e-76 189 699 234 747
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
5.24e-76 42 703 48 747
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2
7.40e-76 195 699 238 745
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000040 0.000007

TMHMM  Annotations      help

There is no transmembrane helices in EDK45110.1.