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CAZyme Information: EDK43213.1

You are here: Home > Sequence: EDK43213.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lodderomyces elongisporus
Lineage Ascomycota; Saccharomycetes; ; Debaryomycetaceae; Lodderomyces; Lodderomyces elongisporus
CAZyme ID EDK43213.1
CAZy Family GH16
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1097 CH981525|CGC8 122601.97 8.3642
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LelongisporusNRRLYB-4239 5908 379508 109 5799
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in EDK43213.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM21 675 823 5.3e-30 0.9813084112149533

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397445 CBM_21 1.22e-42 674 824 3 113
Carbohydrate/starch-binding module (family 21). This family consists of several eukaryotic proteins that are thought to be involved in the regulation of glycogen metabolism. For instance, the mouse PTG protein has been shown to interact with glycogen synthase, phosphorylase kinase, phosphorylase a: these three enzymes have key roles in the regulation of glycogen metabolism. PTG also binds the catalytic subunit of protein phosphatase 1 (PP1C) and localizes it to glycogen. Subsets of similar interactions have been observed with several other members of this family, such as the yeast PIG1, PIG2, GAC1 and GIP2 proteins. While the precise function of these proteins is not known, they may serve a scaffold function, bringing together the key enzymes in glycogen metabolism. This family is a carbohydrate binding domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.59e-109 510 1097 91 712
7.20e-107 510 1097 91 700
4.99e-103 510 937 33 432
3.42e-96 540 1063 219 729
1.31e-90 315 1062 48 552

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.32e-06 669 827 24 137
Solution structure of the carbohydrate binding module of the muscle glycogen-targeting subunit of Protein Phosphatase-1 [Oryctolagus cuniculus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.39e-07 662 830 366 514
GSY2-interacting protein PIG2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PIG2 PE=1 SV=1
8.73e-07 645 823 78 208
Protein phosphatase 1 regulatory subunit 3C OS=Xenopus tropicalis OX=8364 GN=ppp1r3c PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000025 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in EDK43213.1.