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CAZyme Information: CVL08698.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium mangiferae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium mangiferae | |||||||||||
| CAZyme ID | CVL08698.1 | |||||||||||
| CAZy Family | GT62 | |||||||||||
| CAZyme Description | Probable rhamnogalacturonase A [Source:UniProtKB/TrEMBL;Acc:A0A1L7UDC8] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.171:11 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 87 | 355 | 3e-44 | 0.8061538461538461 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 215540 | PLN03010 | 1.38e-16 | 42 | 356 | 48 | 391 | polygalacturonase |
| 177865 | PLN02218 | 3.39e-15 | 40 | 354 | 67 | 418 | polygalacturonase ADPG |
| 215426 | PLN02793 | 7.28e-15 | 111 | 357 | 151 | 412 | Probable polygalacturonase |
| 395231 | Glyco_hydro_28 | 2.18e-14 | 128 | 360 | 85 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 165802 | PLN02155 | 5.14e-12 | 42 | 356 | 29 | 380 | polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 523 | 1 | 547 | |
| 0.0 | 1 | 523 | 1 | 547 | |
| 0.0 | 1 | 523 | 1 | 547 | |
| 0.0 | 1 | 523 | 1 | 547 | |
| 0.0 | 1 | 523 | 1 | 548 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.91e-165 | 21 | 412 | 1 | 414 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 2.23e-11 | 48 | 353 | 23 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.77e-178 | 5 | 464 | 2 | 490 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 5.05e-169 | 3 | 411 | 2 | 433 | Probable rhamnogalacturonase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgA PE=3 SV=1 |
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| 5.05e-169 | 3 | 411 | 2 | 433 | Probable rhamnogalacturonase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rhgA PE=3 SV=1 |
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| 7.99e-168 | 21 | 417 | 19 | 438 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
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| 1.49e-165 | 21 | 417 | 19 | 438 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000297 | 0.999684 | CS pos: 18-19. Pr: 0.9822 |