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CAZyme Information: CVL08328.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium mangiferae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium mangiferae | |||||||||||
| CAZyme ID | CVL08328.1 | |||||||||||
| CAZy Family | GT4 | |||||||||||
| CAZyme Description | Probable rhamnogalacturonase A [Source:UniProtKB/TrEMBL;Acc:A0A1L7UC58] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 67 | 385 | 2.6e-49 | 0.9138461538461539 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 1.02e-20 | 148 | 393 | 61 | 317 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 9.86e-18 | 37 | 351 | 69 | 383 | polygalacturonase ADPG |
| 215540 | PLN03010 | 2.53e-17 | 37 | 401 | 48 | 396 | polygalacturonase |
| 215426 | PLN02793 | 3.85e-16 | 40 | 351 | 57 | 369 | Probable polygalacturonase |
| 178580 | PLN03003 | 7.90e-16 | 37 | 349 | 25 | 330 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 477 | 1 | 488 | |
| 0.0 | 1 | 477 | 1 | 488 | |
| 0.0 | 1 | 477 | 1 | 488 | |
| 0.0 | 1 | 477 | 1 | 488 | |
| 0.0 | 1 | 477 | 1 | 488 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.01e-99 | 18 | 455 | 1 | 404 | Rhamnogalacturonase A From Aspergillus Aculeatus [Aspergillus aculeatus] |
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| 3.78e-08 | 206 | 354 | 173 | 322 | Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger],1CZF_B Endo-Polygalacturonase Ii From Aspergillus Niger [Aspergillus niger] |
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| 2.78e-06 | 166 | 345 | 151 | 332 | Chain A, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.53e-101 | 10 | 465 | 11 | 431 | Probable rhamnogalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=rhgA PE=3 SV=1 |
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| 4.30e-101 | 10 | 465 | 11 | 431 | Rhamnogalacturonase A OS=Aspergillus niger OX=5061 GN=rhgA PE=1 SV=1 |
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| 2.89e-99 | 10 | 465 | 10 | 430 | Rhamnogalacturonase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rhgA PE=2 SV=2 |
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| 3.18e-99 | 14 | 455 | 15 | 422 | Rhamnogalacturonase A OS=Aspergillus aculeatus OX=5053 GN=rhgA PE=1 SV=1 |
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| 5.88e-99 | 5 | 465 | 9 | 437 | Probable rhamnogalacturonase E OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=rhgE PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000259 | 0.999709 | CS pos: 17-18. Pr: 0.9820 |