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CAZyme Information: CVL05268.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium mangiferae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium mangiferae | |||||||||||
| CAZyme ID | CVL05268.1 | |||||||||||
| CAZy Family | GH76 | |||||||||||
| CAZyme Description | Probable PGU1-Endo-polygalacturonase [Source:UniProtKB/TrEMBL;Acc:A0A1L7U3E9] | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 37 | 351 | 4.6e-73 | 0.8953846153846153 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.90e-134 | 41 | 358 | 1 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 2.81e-28 | 91 | 348 | 156 | 416 | polygalacturonase ADPG |
| 178580 | PLN03003 | 3.83e-25 | 38 | 318 | 48 | 333 | Probable polygalacturonase At3g15720 |
| 215426 | PLN02793 | 5.21e-24 | 91 | 315 | 143 | 367 | Probable polygalacturonase |
| 227721 | Pgu1 | 4.01e-21 | 27 | 287 | 94 | 408 | Polygalacturonase [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 6.08e-250 | 1 | 357 | 1 | 358 | |
| 3.79e-249 | 1 | 358 | 1 | 360 | |
| 3.79e-249 | 1 | 358 | 1 | 360 | |
| 3.79e-249 | 1 | 358 | 1 | 360 | |
| 3.79e-249 | 1 | 358 | 1 | 360 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.45e-189 | 24 | 356 | 1 | 335 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
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| 6.58e-159 | 20 | 358 | 5 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 2.67e-158 | 20 | 358 | 5 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 5.43e-156 | 24 | 358 | 1 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.80e-148 | 25 | 358 | 3 | 339 | Polygalacturonase From Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 8.49e-187 | 1 | 356 | 1 | 359 | Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum OX=290576 GN=PG1 PE=3 SV=1 |
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| 1.19e-158 | 2 | 358 | 4 | 364 | Polygalacturonase OS=Cochliobolus carbonum OX=5017 GN=PGN1 PE=3 SV=1 |
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| 2.10e-157 | 20 | 358 | 33 | 376 | Polygalacturonase OS=Penicillium griseoroseum OX=84562 GN=PGG1 PE=3 SV=1 |
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| 3.23e-155 | 12 | 358 | 32 | 380 | Endo-polygalacturonase OS=Sclerotinia sclerotiorum OX=5180 GN=PG1 PE=3 SV=1 |
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| 1.63e-153 | 17 | 358 | 20 | 360 | Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000302 | 0.999680 | CS pos: 23-24. Pr: 0.9664 |