You are browsing environment: FUNGIDB
CAZyme Information: CVK98371.1
You are here: Home > Sequence: CVK98371.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Fusarium mangiferae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Nectriaceae; Fusarium; Fusarium mangiferae | |||||||||||
| CAZyme ID | CVK98371.1 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | Amb_all domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A1L7TSY4] | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 83 | 263 | 2.6e-106 | 0.989010989010989 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 226384 | PelB | 7.20e-65 | 51 | 326 | 48 | 344 | Pectate lyase [Carbohydrate transport and metabolism]. |
| 214765 | Amb_all | 7.35e-63 | 89 | 264 | 12 | 190 | Amb_all domain. |
| 366158 | Pec_lyase_C | 3.81e-44 | 69 | 260 | 11 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 9.46e-232 | 1 | 328 | 1 | 328 | |
| 9.46e-232 | 1 | 328 | 1 | 328 | |
| 9.46e-232 | 1 | 328 | 1 | 328 | |
| 9.46e-232 | 1 | 328 | 1 | 328 | |
| 1.91e-231 | 1 | 326 | 1 | 326 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7.64e-48 | 27 | 326 | 18 | 325 | Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
|
| 5.35e-35 | 89 | 237 | 76 | 246 | Chain A, PECTATE LYASE E [Dickeya chrysanthemi] |
|
| 1.50e-32 | 91 | 238 | 130 | 302 | Structure of the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
|
| 2.19e-31 | 51 | 249 | 21 | 225 | Catalytic function and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
|
| 5.33e-31 | 48 | 324 | 42 | 341 | Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O88_A Chain A, Pectate Lyase C [Dickeya chrysanthemi],1O8D_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8E_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8F_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8G_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8H_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8I_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8J_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8K_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8L_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1O8M_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi],1PLU_A Chain A, Protein (pectate Lyase C) [Dickeya chrysanthemi],2PEC_A Chain A, PECTATE LYASE C [Dickeya chrysanthemi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.48e-63 | 9 | 286 | 7 | 286 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
|
| 2.74e-61 | 42 | 306 | 36 | 302 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
|
| 3.87e-61 | 42 | 306 | 36 | 302 | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1 |
|
| 1.26e-58 | 63 | 306 | 59 | 300 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
|
| 1.26e-58 | 63 | 306 | 59 | 300 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000055 | 0.999979 | CS pos: 17-18. Pr: 0.9731 |