logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CTRG_01440-t43_1-p1

You are here: Home > Sequence: CTRG_01440-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Candida tropicalis
Lineage Ascomycota; Saccharomycetes; ; Debaryomycetaceae; Candida; Candida tropicalis
CAZyme ID CTRG_01440-t43_1-p1
CAZy Family GH18
CAZyme Description conserved hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
820 GG692396|CGC7 94946.42 5.4682
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CtropicalisMYA3404 6441 294747 187 6254
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.113:6

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH47 51 521 1.2e-131 0.9932735426008968

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396217 Glyco_hydro_47 2.69e-144 53 522 4 453
Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
240427 PTZ00470 1.76e-54 45 525 74 521
glycoside hydrolase family 47 protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 13 820 12 836
0.0 9 820 7 842
0.0 9 820 7 842
0.0 9 820 7 842
0.0 9 820 8 843

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.72e-38 40 534 17 477
Structure of mouse Golgi alpha-1,2-mannosidase IA reveals the molecular basis for substrate specificity among Class I enzymes (family 47 glycosidases) [Mus musculus]
3.65e-38 40 519 19 464
Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex [Mus musculus],5KKB_B Structure of mouse Golgi alpha-1,2-mannosidase IA and Man9GlcNAc2-PA complex [Mus musculus]
1.38e-37 30 520 75 532
Crystal Structure Of Human Class I alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue [Homo sapiens]
3.38e-37 37 520 4 454
Crystal Structure Of Human Class I Alpha1,2-Mannosidase [Homo sapiens]
3.50e-37 37 520 4 454
Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin [Homo sapiens],1FO3_A Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With Kifunensine [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.49e-118 34 682 26 657
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MNL1 PE=1 SV=1
4.37e-95 31 577 113 635
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus OX=10090 GN=Edem1 PE=1 SV=1
1.35e-94 31 529 118 593
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens OX=9606 GN=EDEM1 PE=1 SV=1
7.39e-88 43 518 35 473
ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=mnl1 PE=3 SV=2
4.61e-83 15 541 21 518
ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens OX=9606 GN=EDEM3 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000250 0.999730 CS pos: 27-28. Pr: 0.9752

TMHMM  Annotations      help

There is no transmembrane helices in CTRG_01440-t43_1-p1.