logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CR_00180C_B-T-p1

You are here: Home > Sequence: CR_00180C_B-T-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Candida albicans
Lineage Ascomycota; Saccharomycetes; ; Debaryomycetaceae; Candida; Candida albicans
CAZyme ID CR_00180C_B-T-p1
CAZy Family GT62
CAZyme Description Chitinase, putative N-terminal catalytic domain, has secretory signal sequence, lacks S/T region and N-glycosylation motifs of Chs2p and Chs3p, alkaline downregulated, expression not detected in yeast-form or hyphal cells
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
462 Ca22chrRB_C_albicans_SC5314|CGC1 48890.30 4.3911
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CalbicansSC5314_B 6415 N/A 215 6200
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.14:12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 18 238 3.3e-27 0.6621621621621622

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
119356 GH18_hevamine_XipI_class_III 2.23e-104 18 285 1 279
This conserved domain family includes xylanase inhibitor Xip-I, and the class III plant chitinases such as hevamine, concanavalin B, and PPL2, all of which have a glycosyl hydrolase family 18 (GH18) domain. Hevamine is a class III endochitinase that hydrolyzes the linear polysaccharide chains of chitin and peptidoglycan and is important for defense against pathogenic bacteria and fungi. PPL2 (Parkia platycephala lectin 2) is a class III chitinase from Parkia platycephala seeds that hydrolyzes beta(1-4) glycosidic bonds linking 2-acetoamido-2-deoxy-beta-D-glucopyranose units in chitin.
395573 Glyco_hydro_18 6.31e-21 19 223 1 185
Glycosyl hydrolases family 18.
119349 GH18_chitinase-like 3.28e-13 20 205 1 177
The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.
226000 Chi1 1.27e-06 69 232 76 241
Chitinase [Carbohydrate transport and metabolism].
119350 GH18_chitinase_D-like 1.30e-06 24 208 10 197
GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 462 1 462
0.0 1 462 1 462
2.38e-279 1 462 1 453
6.03e-156 17 460 13 430
3.32e-153 17 460 13 431

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.62e-111 18 285 6 275
ScCTS1_apo crystal structure [Saccharomyces cerevisiae],2UY3_A ScCTS1_8-chlorotheophylline crystal structure [Saccharomyces cerevisiae],2UY4_A ScCTS1_acetazolamide crystal structure [Saccharomyces cerevisiae],2UY5_A ScCTS1_kinetin crystal structure [Saccharomyces cerevisiae],4TXE_A ScCTS1 in complex with compound 5 [Saccharomyces cerevisiae]
3.37e-48 20 284 3 269
CRYSTAL STRUCTURES OF HEVAMINE, A PLANT DEFENCE PROTEIN WITH CHITINASE AND LYSOZYME ACTIVITY, AND ITS COMPLEX WITH AN INHIBITOR [Hevea brasiliensis],1LLO_A Chain A, HEVAMINE [Hevea brasiliensis],2HVM_A Hevamine A At 1.8 Angstrom Resolution [Hevea brasiliensis]
1.90e-46 20 284 3 269
Chain A, Hevamine A [Hevea brasiliensis]
3.71e-46 20 284 3 269
Chain A, Hevamine A [Hevea brasiliensis]
4.91e-46 20 271 3 254
cDNA cloning and 1.75A crystal structure determination of PPL2, a novel chimerolectin from Parkia platycephala seeds exhibiting endochitinolytic activity [Parkia platycephala]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 462 1 462
Chitinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHT1 PE=1 SV=1
0.0 1 462 1 462
Chitinase 1 OS=Candida albicans OX=5476 GN=CHT1 PE=3 SV=2
3.65e-107 18 285 27 296
Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CTS1 PE=1 SV=2
1.21e-100 10 275 14 283
Chitinase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHT2 PE=1 SV=2
7.27e-91 16 284 21 306
Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=CHT3 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000303 0.999650 CS pos: 17-18. Pr: 0.8335

TMHMM  Annotations      download full data without filtering help

Start End
2 24