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CAZyme Information: CPC735_063450-t26_1-p1

You are here: Home > Sequence: CPC735_063450-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coccidioides posadasii
Lineage Ascomycota; Eurotiomycetes; ; Onygenaceae; Coccidioides; Coccidioides posadasii
CAZyme ID CPC735_063450-t26_1-p1
CAZy Family GT90
CAZyme Description Raffinose synthase or seed imbibition protein Sip1 family protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
911 ACFW01000015|CGC2 101539.21 7.2263
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CposadasiiC735deltSOWgp 7255 222929 26 7229
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CPC735_063450-t26_1-p1.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
283371 Raffinose_syn 1.96e-61 369 850 194 721
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
166325 PLN02684 6.09e-59 374 850 202 705
Probable galactinol--sucrose galactosyltransferase
165863 PLN02219 4.78e-58 369 726 194 561
probable galactinol--sucrose galactosyltransferase 2
215203 PLN02355 1.80e-57 350 860 188 724
probable galactinol--sucrose galactosyltransferase 1
215381 PLN02711 3.07e-41 374 865 213 760
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 10 911 26 956
0.0 10 911 26 956
0.0 22 911 22 958
0.0 22 910 24 944
0.0 11 911 258 1199

PDB Hits      help

CPC735_063450-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.24e-54 350 857 183 717
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
1.05e-50 374 860 204 714
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
5.27e-47 369 689 193 535
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
3.19e-36 374 850 225 741
Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1
1.40e-35 378 851 237 758
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000055 0.000002

TMHMM  Annotations      help

There is no transmembrane helices in CPC735_063450-t26_1-p1.