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CAZyme Information: CPAG_05576-t26_1-p1

You are here: Home > Sequence: CPAG_05576-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coccidioides posadasii
Lineage Ascomycota; Eurotiomycetes; ; Onygenaceae; Coccidioides; Coccidioides posadasii
CAZyme ID CPAG_05576-t26_1-p1
CAZy Family GH47
CAZyme Description choline dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
515 56561.44 4.5667
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CposadasiiRMSCC3488 10016 454284 119 9897
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CPAG_05576-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 14 509 2.1e-68 0.5080906148867314

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 1.44e-68 14 505 4 532
choline dehydrogenase; Validated
225186 BetA 8.57e-65 14 505 6 534
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 1.89e-38 363 500 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 4.66e-13 92 257 21 168
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.27e-06 334 480 388 552
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.59e-80 10 505 8 598
4.59e-80 10 505 8 598
9.01e-80 10 505 8 598
9.01e-80 10 505 8 598
6.22e-75 9 505 7 598

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.51e-52 16 506 6 566
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
2.65e-38 8 508 6 530
Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis]
3.63e-38 8 508 6 530
Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis]
3.63e-38 8 508 6 530
Chain A, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis]
2.04e-37 16 505 17 588
Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.95e-51 7 504 5 616
Dehydrogenase OS=Didymella fabae OX=372025 GN=orf9 PE=3 SV=1
2.01e-50 10 505 8 609
Dehydrogenase citC OS=Monascus ruber OX=89489 GN=citC PE=1 SV=1
2.01e-50 10 505 8 609
Dehydrogenase mpl7 OS=Monascus purpureus OX=5098 GN=mpl7 PE=1 SV=1
6.89e-50 14 504 45 615
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
6.89e-50 14 504 45 615
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000044 0.000004

TMHMM  Annotations      help

There is no transmembrane helices in CPAG_05576-t26_1-p1.