CAZyme Information: CNBL1720-t26_1-p1

Basic Information

• Species: Cryptococcus neoformans
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus neoformans
• CAZyme ID: CNBL1720-t26_1-p1
• CAZy Family: PL38
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
154	CM000051|CGC2	16822.63	3.2521

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CneoformansB-3501A	6608	283643	108	6500

• Gene Location: location=CM000051:547829-548812(-)

Full Sequence      

MLAAFALAVLPLLSSVIAIDGCTRNATVQSGDTCDSISRQYGVSTYQLALVNDATIDENC
DNLTPDETVCLGIEGQDCTKVYTVVANDTCAWVQEMYGISNETLYANNPQIDADCENIYV
GEVLCVDTDAFSYPSYNESLYNALAWTYLPYCDE

Enzyme Prediction     

EC	-	-

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
197609	LysM	1.90e-08	27	71	3	44	Lysin motif.
212030	LysM	6.09e-08	80	126	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
396179	LysM	7.32e-07	27	71	2	42	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
212030	LysM	1.10e-06	27	59	4	36	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
197609	LysM	8.96e-05	82	126	2	44	Lysin motif.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AUB29172.1|CBM50	6.97e-109	1	154	1	154
KGB78511.2|CBM50	1.64e-107	1	154	1	154
UOH84953.1|CBM50	1.26e-68	48	154	933	1039
CDZ97770.1|CBM50	1.26e-35	17	154	14	158
VWO96649.1|CBM50	3.24e-34	6	154	9	162

PDB Hits     

CNBL1720-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4ALG0|LYSM1_ARTBC	7.30e-07	19	128	320	457	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
sp|D4B4Q2|LYSM4_ARTBC	7.50e-07	64	126	297	358	LysM domain-containing protein ARB_03442 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03442 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000335	0.999645	CS pos: 18-19. Pr: 0.9367

TMHMM  Annotations     

There is no transmembrane helices in CNBL1720-t26_1-p1.