logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CNBG3070-t26_1-p1

You are here: Home > Sequence: CNBG3070-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus neoformans
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus neoformans
CAZyme ID CNBG3070-t26_1-p1
CAZy Family GH5
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
411 42812.42 5.3326
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CneoformansB-3501A 6608 283643 108 6500
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CNBG3070-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 153 364 5.5e-73 0.9857142857142858

CDD Domains      help

CNBG3070-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.19e-269 1 411 1 401
2.33e-245 1 411 1 396
2.33e-245 1 411 1 396
5.46e-244 1 411 1 396
1.84e-235 1 411 1 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.87e-41 154 364 58 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
1.28e-09 193 364 74 237
Structure of alginate lyase Aly36B [Chitinophaga sp. MD30]

Swiss-Prot Hits      help

CNBG3070-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000226 0.999746 CS pos: 23-24. Pr: 0.9758

TMHMM  Annotations      help

There is no transmembrane helices in CNBG3070-t26_1-p1.