CAZyme Information: CNBE4740-t26_1-p1

Basic Information

• Species: Cryptococcus neoformans
• Lineage: Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus neoformans
• CAZyme ID: CNBE4740-t26_1-p1
• CAZy Family: GH18
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1061	CM000044|CGC3	120185.79	6.1586

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CneoformansB-3501A	6608	283643	108	6500

• Gene Location: location=CM000044:1278171-1281614(-)

Full Sequence      

MSANPLIYPSSRRPFSLDVFKSPPSEYRGAPFWAWVTKQEKQSTVDQIKMLEEMGMGGFH
MHTRVGLDIPYLGEEFMSIVEGCVDEAKKRGMSAFLYDEDRWPSGFAGGKVLEGHPELRH
LHLLFTPWAYGSELGYKKPDFPIANAAPMRSELGTLLAMYAIKLQDGFLHSSRIISSTSD
LKTSEVVWYAYAEPLPDSGFFGDQTYTDLLSKEMTSRFIEVTHEVYKKHVGSSFGSVVPS
IFTDEPQYCPMSTLNVAEKPQDVFLPWTRGIIGSFKASKGGDLLELLPRLVWDSADGQPN
TTRSQFLDHVCELFSTNYIGTIAKWCAKNNIMCIGHMNAEPTLASQTAQNGEVMRCYREM
QFPGIDMLCDKRELNTAKQAASVARQYGRPGVMSELYGVTGWQFTFEGHKGQGDWQAALG
VTLRVHHLFWSTMEGEAKRDYPACIGYQSPWWKEYKTIEDHFARVNSALTRGKPVTRVAV
IHPIESYWLCFGPKDKNAEELDYREQAFAQLTEWLLGSHIDFDFISESLFPELTSLEEIT
STLSVGECKYDVVIAPNLRTIRSTTLERLDKFAKEGGKVIFAGSTPTLVDTLTPSSPPSI
PMAVTLPWSRAQVLSALQPFRDVDMVINESTLYRTQGKKADTLFYQMREEGEERWVFICN
TDRKESTPVEVGFKGEWKIEVLDTMKADAWAIQCNQRNGWTYLKYWFDGCESVLLHLVQG
SSKNGKPQTVVRRQYKQVADVKLQSISLSEPNTLLLDYCTYKWDDEPWSSSSEEILAIDQ
LLRRRFGLFLKGAKFRQPYTIPSSSRKPIGKLRLRFVFRAACEVQEAHLAIEGADKVKMW
LDGQQAKMKVDGWWVDKSIKTIPLPCITEGTHTIEFEYDYSMLTNLERIYILGSFGVDVR
GRTTSIVPLDLSTIEWGDITRQNLPFYTGNITYHCTFTSLGNTPQAIRVARYAGPAVSVD
VDGSRAALLVHEPYAFELGNLSKGAHTVDFTCYGDRHNAFGAVHLVPNKTNWLNADTWRS
DYDWWSEEYVLGEIGILNAPRVEEPGLEVPKQVRRGLMLHV

Enzyme Prediction     

EC	3.2.1.40:2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	19	740	3.2e-57	0.8070388349514563

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
153237	A4_beta-galactosidase_middle_domain	6.54e-10	478	601	1	104	A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
369931	Glyco_hydro_42M	7.02e-07	477	581	2	89	Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.
407266	Glyco_hydro_106	1.61e-06	208	587	402	760	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AAW43679.2|GH106	0.0	1	1061	1	1061
AFR95757.1|GH106	0.0	1	1061	1	1063
AUB25597.1|GH106	0.0	1	1061	1	1063
UOH82679.1|GH106	0.0	1	1061	1	1033
QSZ35257.1|GH106	0.0	4	1043	31	1068

PDB Hits     

CNBE4740-t26_1-p1 has no PDB hit.

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|T2KNA8|PLH15_FORAG	6.12e-14	20	723	34	743	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000042	0.000000

TMHMM  Annotations     

There is no transmembrane helices in CNBE4740-t26_1-p1.