logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CLCR_05595-t43_1-p1

You are here: Home > Sequence: CLCR_05595-t43_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cladophialophora carrionii
Lineage Ascomycota; Eurotiomycetes; ; Herpotrichiellaceae; Cladophialophora; Cladophialophora carrionii
CAZyme ID CLCR_05595-t43_1-p1
CAZy Family GH35
CAZyme Description putative GMC oxidoreductase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
568 61405.23 6.0700
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CcarrioniiKSF 11240 N/A 59 11181
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CLCR_05595-t43_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 14 566 1.5e-132 0.9911971830985915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 6.53e-91 14 564 6 530
choline dehydrogenase; Validated
225186 BetA 6.28e-82 14 566 8 534
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
274888 Rv0697 2.38e-45 15 565 2 486
dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function.
398739 GMC_oxred_C 3.55e-45 416 561 2 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.08e-19 88 274 15 189
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.73e-193 6 565 3 572
6.18e-190 10 567 5 572
2.01e-188 10 565 5 570
2.01e-188 10 565 5 570
3.05e-188 6 565 3 580

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.96e-58 14 565 7 569
Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_B Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_C Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40]
6.87e-58 14 565 7 569
Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_B Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_C Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]
9.53e-58 14 565 7 569
Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_B Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_C Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]
5.17e-52 2 565 77 636
Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
5.93e-52 2 565 1 560
Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.81e-62 15 566 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) OX=444178 GN=betA PE=3 SV=1
2.81e-62 15 566 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) OX=470137 GN=betA PE=3 SV=1
3.91e-62 15 566 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330) OX=204722 GN=betA PE=3 SV=1
5.44e-62 15 566 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1
5.44e-62 15 566 4 526
Oxygen-dependent choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) OX=483179 GN=betA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000040 0.000006

TMHMM  Annotations      help

There is no transmembrane helices in CLCR_05595-t43_1-p1.