logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CKF44_03413-t42_1-p1

You are here: Home > Sequence: CKF44_03413-t42_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus neoformans
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus neoformans
CAZyme ID CKF44_03413-t42_1-p1
CAZy Family GH16
CAZyme Description alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
396 CP022328.1|CGC3 41722.26 4.6689
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CneoformansKN99 6967 N/A 0 6967
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CKF44_03413-t42_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 138 349 7.1e-75 0.9857142857142858

CDD Domains      help

CKF44_03413-t42_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.61e-277 1 396 1 396
2.61e-277 1 396 1 396
4.62e-271 1 396 1 396
2.80e-248 1 396 1 401
7.51e-238 1 396 1 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.28e-42 140 349 59 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3.17e-08 178 349 74 237
Structure of alginate lyase Aly36B [Chitinophaga sp. MD30]

Swiss-Prot Hits      help

CKF44_03413-t42_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000219 0.999750 CS pos: 23-24. Pr: 0.9773

TMHMM  Annotations      help

There is no transmembrane helices in CKF44_03413-t42_1-p1.