logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CGB_G4370W-t26_1-p1

You are here: Home > Sequence: CGB_G4370W-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cryptococcus gattii VGI
Lineage Arthropoda; Insecta; ; Eriococcidae; Cryptococcus; Cryptococcus gattii VGI
CAZyme ID CGB_G4370W-t26_1-p1
CAZy Family GH79
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
421 44694.85 7.9840
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_CgattiiWM276 6580 367775 15 6565
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CGB_G4370W-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 163 374 2.4e-73 0.9857142857142858

CDD Domains      help

CGB_G4370W-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.00e-290 1 421 1 421
1.47e-246 1 421 1 396
3.30e-228 1 421 1 401
1.75e-224 1 421 1 396
1.75e-224 1 421 1 396

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.08e-43 165 374 59 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3.69e-11 188 374 61 237
Structure of alginate lyase Aly36B [Chitinophaga sp. MD30]

Swiss-Prot Hits      help

CGB_G4370W-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000236 0.999743 CS pos: 23-24. Pr: 0.9755

TMHMM  Annotations      help

There is no transmembrane helices in CGB_G4370W-t26_1-p1.