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CAZyme Information: CDH56888.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lichtheimia corymbifera | |||||||||||
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| Lineage | Mucoromycota; Mucoromycetes; ; Lichtheimiaceae; Lichtheimia; Lichtheimia corymbifera | |||||||||||
| CAZyme ID | CDH56888.1 | |||||||||||
| CAZy Family | GT2 | |||||||||||
| CAZyme Description | glycogen starch adp-glucose glycosyltransferasefamily 5 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 2.4.1.21:13 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT5 | 134 | 694 | 5.4e-53 | 0.9576271186440678 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 340822 | GT5_Glycogen_synthase_DULL1-like | 1.55e-30 | 134 | 718 | 2 | 473 | Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| 234809 | glgA | 6.52e-21 | 132 | 718 | 1 | 461 | glycogen synthase GlgA. |
| 404563 | Glyco_trans_1_4 | 1.81e-20 | 505 | 674 | 1 | 138 | Glycosyl transferases group 1. |
| 223374 | GlgA | 8.41e-19 | 136 | 718 | 5 | 476 | Glycogen synthase [Carbohydrate transport and metabolism]. |
| 340831 | GT4_PimA-like | 1.43e-17 | 505 | 691 | 192 | 351 | phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 724 | 1 | 723 | |
| 1.72e-233 | 1 | 724 | 1 | 805 | |
| 1.42e-99 | 65 | 724 | 82 | 808 | |
| 2.28e-18 | 147 | 627 | 21 | 422 | |
| 5.37e-18 | 147 | 627 | 21 | 422 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.50e-11 | 506 | 621 | 245 | 363 | Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_B Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_C Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_D Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_E Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_F Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_G Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_H Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_I Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_J Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_K Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus],6KIH_L Sucrose-phosphate synthase (tll1590) from Thermosynechococcus elongatus [Thermosynechococcus vestitus] |
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| 6.79e-09 | 478 | 642 | 13 | 170 | Structure of the C domain of glycogen synthase from Pyrococcus abyssi [Pyrococcus abyssi] |
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| 3.77e-08 | 478 | 642 | 228 | 385 | Chain A, GlgA glycogen synthase [Pyrococcus abyssi],3L01_B Chain B, GlgA glycogen synthase [Pyrococcus abyssi] |
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| 3.88e-08 | 478 | 642 | 228 | 385 | Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations [Pyrococcus abyssi],3FRO_B Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations [Pyrococcus abyssi],3FRO_C Crystal structure of Pyrococcus abyssi glycogen synthase with open and closed conformations [Pyrococcus abyssi] |
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| 3.89e-08 | 478 | 642 | 229 | 386 | Structure of glycogen synthase from Pyrococcus abyssi [Pyrococcus abyssi],2BIS_B Structure of glycogen synthase from Pyrococcus abyssi [Pyrococcus abyssi],2BIS_C Structure of glycogen synthase from Pyrococcus abyssi [Pyrococcus abyssi] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.90e-13 | 381 | 722 | 210 | 485 | Glycogen synthase OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=glgA PE=3 SV=1 |
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| 7.82e-13 | 272 | 718 | 103 | 486 | Glycogen synthase 1 OS=Synechococcus sp. (strain JA-3-3Ab) OX=321327 GN=glgA1 PE=3 SV=1 |
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| 7.32e-12 | 381 | 625 | 210 | 418 | Glycogen synthase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) OX=391774 GN=glgA PE=3 SV=1 |
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| 7.32e-12 | 381 | 625 | 210 | 418 | Glycogen synthase OS=Desulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / NCIMB 8303 / VKM B-1760 / Hildenborough) OX=882 GN=glgA PE=3 SV=1 |
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| 1.23e-11 | 373 | 676 | 199 | 441 | Glycogen synthase OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=glgA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000030 | 0.000010 |
