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CAZyme Information: CDH51686.1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lichtheimia corymbifera | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Mucoromycota; Mucoromycetes; ; Lichtheimiaceae; Lichtheimia; Lichtheimia corymbifera | |||||||||||
| CAZyme ID | CDH51686.1 | |||||||||||
| CAZy Family | GH152 | |||||||||||
| CAZyme Description | glycoside hydrolase family 28 protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.67:7 | 3.2.1.-:2 |
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CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 3.78e-38 | 43 | 379 | 1 | 319 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 215540 | PLN03010 | 1.27e-28 | 3 | 376 | 29 | 390 | polygalacturonase |
| 177865 | PLN02218 | 1.88e-25 | 31 | 365 | 82 | 412 | polygalacturonase ADPG |
| 215120 | PLN02188 | 7.57e-23 | 31 | 375 | 51 | 390 | polygalacturonase/glycoside hydrolase family protein |
| 178580 | PLN03003 | 3.01e-18 | 18 | 363 | 22 | 359 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.23e-297 | 1 | 395 | 1 | 395 | |
| 1.48e-61 | 12 | 385 | 16 | 397 | |
| 1.60e-54 | 9 | 385 | 5 | 395 | |
| 1.07e-53 | 26 | 384 | 27 | 374 | |
| 2.17e-48 | 28 | 385 | 48 | 406 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.40e-45 | 25 | 374 | 24 | 373 | Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
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| 1.49e-26 | 22 | 331 | 3 | 304 | Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides] |
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| 4.08e-19 | 59 | 378 | 39 | 341 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.08e-19 | 59 | 378 | 39 | 341 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 9.33e-19 | 59 | 378 | 31 | 333 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.49e-49 | 8 | 375 | 20 | 374 | Exopolygalacturonase rpg16 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg16 PE=1 SV=1 |
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| 1.23e-46 | 8 | 392 | 20 | 385 | Exopolygalacturonase rpg15 OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) OX=246409 GN=rpg15 PE=1 SV=1 |
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| 4.71e-46 | 24 | 385 | 54 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2 |
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| 4.71e-46 | 24 | 385 | 54 | 431 | Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2 |
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| 1.33e-45 | 22 | 385 | 52 | 433 | Probable exopolygalacturonase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000198 | 0.999776 | CS pos: 19-20. Pr: 0.9640 |