logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CDH49253.1

You are here: Home > Sequence: CDH49253.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lichtheimia corymbifera
Lineage Mucoromycota; Mucoromycetes; ; Lichtheimiaceae; Lichtheimia; Lichtheimia corymbifera
CAZyme ID CDH49253.1
CAZy Family CE16
CAZyme Description polysaccharide lyase family 14 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
285 CBTN010000003|CGC3 30138.59 6.3236
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LcorymbiferaJMRCFSU9682 12379 1263082 97 12282
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CDH49253.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 72 281 1.4e-60 0.9809523809523809

CDD Domains      help

CDH49253.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.70e-164 19 285 16 282
2.60e-130 7 284 7 297
4.29e-100 22 285 37 299
4.55e-68 23 285 48 323
8.68e-53 66 285 3 220

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.46e-34 48 282 37 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

CDH49253.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000285 0.999680 CS pos: 21-22. Pr: 0.6036

TMHMM  Annotations      download full data without filtering help

Start End
4 21
249 271