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CAZyme Information: CDH49252.1

You are here: Home > Sequence: CDH49252.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lichtheimia corymbifera
Lineage Mucoromycota; Mucoromycetes; ; Lichtheimiaceae; Lichtheimia; Lichtheimia corymbifera
CAZyme ID CDH49252.1
CAZy Family CBM50|CBM50
CAZyme Description polysaccharide lyase family 14 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
307 33182.45 4.0463
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_LcorymbiferaJMRCFSU9682 12379 1263082 97 12282
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CDH49252.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 94 302 4.8e-63 0.9761904761904762

CDD Domains      help

CDH49252.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.38e-191 1 307 1 299
2.13e-133 12 306 1 282
2.53e-117 10 306 13 299
5.87e-78 19 306 32 323
1.09e-53 94 301 11 215

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.73e-35 95 302 59 269
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

CDH49252.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000212 0.999762 CS pos: 18-19. Pr: 0.9857

TMHMM  Annotations      help

There is no transmembrane helices in CDH49252.1.