CAZyme Information: CDH48592.1

Basic Information

• Species: Lichtheimia corymbifera
• Lineage: Mucoromycota; Mucoromycetes; ; Lichtheimiaceae; Lichtheimia; Lichtheimia corymbifera
• CAZyme ID: CDH48592.1
• CAZy Family: AA5
• CAZyme Description: protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
939		109004.15	8.7809

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_LcorymbiferaJMRCFSU9682	12379	1263082	97	12282

• Gene Location: location=CBTN010000001:921306-924447(-)

Full Sequence      

MLQEEISERLQVGTLLVINLFVLISHTLTDYKAPVIAVVVKQPAGGHDLLATLIVSMCLG
NGPAYNTELYGPSSTMRPPSFSNGLDTRFPPASGTPQSPSSPVNRSYNDYYNAKQRRMNN
PMGTTHLGTDIAVDLGSPARRRPLSSFWSVKDKPRRFFQPHRYRYYHRNRWWLRPLLVVF
FLALVFGYIPFFHLSLPNPTSSNIQSTSQYRDQLLLYRIIGNDLPPRHKEGQTLSNLRFI
LEHEPSFPNTRKIYVLNRINDPVNERAIIQLLEHYNAEYLNIAFNETEYQRIDFRLEDFP
EPDFLHSDDYRRFSKTAKLRALDYTYHDKNLYAMNNNGGRNTALAHGRSIGNAKWIMPFD
GNCFLSQNAFDEIKTQLDRFGDDTKYFIVPMTRLLNNSDLLNNMDERPRSREEPQIIFRF
DAEEEYNLNMRYGRRSKLELLWRLGALENRKLNRPTVAWEPKERPYSKDKGNFRFIGWVF
RLFSGNQAQEENKKEASSIRAFNRLLAIQSTLDALDERIARHTFRHDRLFLYNETELAHI
RHRFWSEDSSILSSMTIFQQRVDDVLLHTREQLAPLAATNDVDHILDAGMRINNDHHPDI
NPPSLDTLGSLTRNITTLALGNYLLGNEKYGRWAANLIRVYFLSERALGDQQSEYSTARM
TSENTHLFEFLSDQGYSFPSLNRVSHVMPKYTDSKLLSTIDLSKTDLTLLLDAMRLLRRA
QMLSHKEYAELQTMMAQVLEYLVAVPTGIHLAQMTDHRGVLYDLQVTALAAFTDDVRFLL
RVANRCRMRIGKQFLQDGSQPYQDISAHARLNGRQVDQNTEDAVLFHYRSLNLQYWTILA
RGIQNSGVANDIWHYTANNQGRISHAVVRHLQQYSSFADDQEKQQRLALLTRLAYSAFTY
SNTFGNDATRQSTQEDWNWIDHYHKTRDESIGILAYLFI

Enzyme Prediction     

No EC number prediction in CDH48592.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL38	704	871	2.9e-16	0.5376344086021505

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398861	Alginate_lyase	9.43e-15	578	883	29	273	Alginate lyase. This family contains several bacterial alginate lyase proteins. Alginate is a family of 1-4-linked copolymers of beta -D-mannuronic acid (M) and alpha -L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyze the depolymerization of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end. This family adopts an all alpha fold.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QBY01811.1|GT0|PL38	9.06e-85	209	859	247	868
QSB05068.1|PL38	2.77e-83	212	855	398	1012
ACF45869.1|PL38	1.77e-75	212	846	556	1166
AKJ94791.1|PL38	7.18e-75	213	855	71	679
AHM03579.1|GT2|PL38	7.76e-75	212	855	241	855

PDB Hits     

CDH48592.1 has no PDB hit.

Swiss-Prot Hits     

CDH48592.1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000009	0.000000

TMHMM  Annotations     

Start	End
171	193