logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CCG84128.1

You are here: Home > Sequence: CCG84128.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Taphrina deformans
Lineage Ascomycota; Taphrinomycetes; ; Taphrinaceae; Taphrina; Taphrina deformans
CAZyme ID CCG84128.1
CAZy Family GT2
CAZyme Description Pectinesterase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 41596.80 7.8335
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TdeformansPYCC5710 4680 1097556 17 4663
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CCG84128.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 57 347 1.6e-57 0.9618055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 2.15e-30 45 321 1 268
Pectinesterase.
178051 PLN02432 4.19e-30 176 354 123 292
putative pectinesterase
215179 PLN02314 4.45e-27 40 359 264 580
pectinesterase
215535 PLN02990 1.29e-26 59 362 271 566
Probable pectinesterase/pectinesterase inhibitor
178606 PLN03043 1.45e-25 178 321 345 494
Probable pectinesterase/pectinesterase inhibitor; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.38e-81 37 371 1746 2073
1.87e-81 37 371 1741 2068
1.87e-81 37 371 1741 2068
1.88e-81 37 371 1745 2072
1.88e-81 37 365 1819 2140

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.18e-30 58 321 18 268
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
7.18e-30 58 321 18 268
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
2.57e-17 38 321 2 275
Pectin methylesterase from Carrot [Daucus carota]
1.16e-16 181 321 125 271
Chain A, Pectinesterase 1 [Solanum lycopersicum]
1.80e-11 176 346 168 358
Pectin methylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.00e-31 85 357 62 329
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.64e-29 31 334 11 308
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.64e-29 31 334 11 308
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
2.27e-29 59 321 44 293
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
3.32e-29 58 321 46 296
Probable pectinesterase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000357 0.999619 CS pos: 21-22. Pr: 0.9724

TMHMM  Annotations      help

There is no transmembrane helices in CCG84128.1.