CAZyme Information: CC1G_14001-t26_1-p1

Basic Information

• Species: Coprinopsis cinerea
• Lineage: Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
• CAZyme ID: CC1G_14001-t26_1-p1
• CAZy Family: GT8
• CAZyme Description: alginate lyase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
418	AACS02000002|CGC8	44907.83	8.2503

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Ccinereaokay7-130	13657	240176	301	13356

• Gene Location: location=AACS02000002:2918225-2919601(+)

Full Sequence      

MLLRLSVFIHVLLASISLSHARPHLGHGRHLSHRNVAHHIHASRNTGSTPGTPTTPEITV
RNTTRTRRRRCTARQLDLEALEGQLLEITDPSNLPSLALESAAPSSSSDPSSSGAPSSPA
VGAPPEPSPTQAPPPSSPPPSSSRVSQLFPVPGFSRSWSTCPEAPNPRELSDGTLRPGNV
LRTTMYYYGNAPDGRPAMVGHFPQGSFTFKNYPQGGFSFYAPGPGDVDLTTAKEATFGYS
VFFPEGFAFNRGGKLPGLYGGNSNEEATSCSGGRRDTSCFSVRLMWRRDGDGEFYTYLPP
GFDSNNRLCNVPPFSECNPTYGASVGRGSFRFPTGTWTTVAERVRLNDPGQSNGEIQLFV
NGQSVLNVGGLVLRDSGAGRIRGIQAQTFFGGSTADWASPKDQDIYFSDFSVAITQSF

Enzyme Prediction     

No EC number prediction in CC1G_14001-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL14	194	411	1.9e-84	0.9907834101382489

CDD Domains     

CC1G_14001-t26_1-p1 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ADE10038.1|PL14_4	4.29e-70	155	414	151	407
AUB27086.1|PL14_4	4.34e-69	189	414	284	497
AFR97104.1|PL14_4	4.34e-69	189	414	284	497
UOH83410.1|PL14_4	1.20e-68	189	414	284	497
AAW45360.1|PL14_4	4.77e-67	189	414	282	495

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GMT_A	1.23e-38	239	412	97	270	Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
3A0N_A	1.93e-09	193	412	35	240	Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]

Swiss-Prot Hits     

CC1G_14001-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000358	0.999628	CS pos: 21-22. Pr: 0.9734

TMHMM  Annotations     

There is no transmembrane helices in CC1G_14001-t26_1-p1.