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CAZyme Information: CC1G_12867-t26_1-p1

You are here: Home > Sequence: CC1G_12867-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_12867-t26_1-p1
CAZy Family GT4
CAZyme Description xylanase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
230 AACS02000005|CGC10 25283.65 7.4212
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:61

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 45 228 4.3e-67 0.9943502824858758

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 1.66e-90 45 226 1 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.70e-142 1 229 1 229
3.13e-130 1 229 1 225
4.93e-127 16 229 5 215
1.45e-115 11 229 11 228
2.36e-115 11 229 11 232

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.00e-87 37 229 3 190
ENDO-1,4-BETA-XYLANASE, ROOM TEMPERATURE, PH 4.0 [Thermomyces lanuginosus]
1.08e-84 37 229 3 190
Chain A, Protein (endo-1,4-beta-xylanase) [Paecilomyces variotii]
2.15e-81 37 229 4 190
Chain A, Endo-1,4-beta-xylanase [Thermochaetoides thermophila],1H1A_B Chain B, Endo-1,4-beta-xylanase [Thermochaetoides thermophila]
2.54e-81 37 229 4 190
Chain A, endoxylanase 11A [Thermochaetoides thermophila],1XNK_B Chain B, endoxylanase 11A [Thermochaetoides thermophila]
1.44e-77 35 229 4 192
High resolution structure of GH11 xylanase from Nectria haematococca [Fusarium vanettenii 77-13-4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.10e-103 35 229 1 196
Endo-1,4-beta-xylanase A OS=Schizophyllum commune OX=5334 GN=XYNA PE=1 SV=1
1.23e-101 11 229 13 233
Endo-1,4-beta-xylanase 1 OS=Leucoagaricus gongylophorus OX=79220 GN=Xyn1 PE=1 SV=1
1.07e-88 13 229 13 221
Endo-1,4-beta-xylanase OS=Thermomyces lanuginosus OX=5541 GN=XYNA PE=1 SV=1
1.07e-87 2 229 3 229
Endo-1,4-beta-xylanase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL4 PE=3 SV=1
1.07e-87 2 229 3 229
Endo-1,4-beta-xylanase 4 OS=Magnaporthe grisea OX=148305 GN=XYL4 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000239 0.999728 CS pos: 19-20. Pr: 0.9673

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_12867-t26_1-p1.