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CAZyme Information: CC1G_12142-t26_1-p1

You are here: Home > Sequence: CC1G_12142-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_12142-t26_1-p1
CAZy Family GT20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
249 26953.15 4.4279
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.39:5 3.2.1.14:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 107 246 3.9e-19 0.6808510638297872

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395527 Ricin_B_lectin 8.93e-13 108 244 2 126
Ricin-type beta-trefoil lectin domain.
238092 RICIN 3.08e-10 107 246 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
395527 Ricin_B_lectin 3.92e-07 163 248 13 86
Ricin-type beta-trefoil lectin domain.
214672 RICIN 9.51e-07 114 247 4 118
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
411518 lectin_1 1.01e-06 117 246 721 836
lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.70e-08 117 244 1774 1896

PDB Hits      help

CC1G_12142-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

CC1G_12142-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000206 0.999773 CS pos: 22-23. Pr: 0.9757

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_12142-t26_1-p1.