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CAZyme Information: CC1G_08018-t26_1-p1

You are here: Home > Sequence: CC1G_08018-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_08018-t26_1-p1
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
295 32592.82 5.0122
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_08018-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA14 28 294 3.9e-72 0.9764705882352941

CDD Domains      help

CC1G_08018-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
5.13e-84 1 294 1 280
1.67e-82 12 294 3 289
8.73e-80 12 295 3 288
8.73e-80 12 295 3 288
1.24e-79 12 295 3 288

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.75e-47 50 295 23 262
Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina],5NO7_B Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina]

Swiss-Prot Hits      help

CC1G_08018-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000533 0.999438 CS pos: 25-26. Pr: 0.9706

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_08018-t26_1-p1.