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CAZyme Information: CC1G_06068-t26_1-p1

You are here: Home > Sequence: CC1G_06068-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_06068-t26_1-p1
CAZy Family GH128
CAZyme Description alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
437 45458.04 10.1208
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_06068-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 210 430 7e-78 0.9907834101382489

CDD Domains      help

CC1G_06068-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.54e-70 174 435 139 397
1.37e-69 150 435 109 394
1.54e-68 150 435 109 395
4.30e-68 150 435 109 395
2.38e-66 168 433 253 497

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.52e-43 212 431 57 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

CC1G_06068-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000230 0.999739 CS pos: 20-21. Pr: 0.9824

TMHMM  Annotations      download full data without filtering help

Start End
7 24