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CAZyme Information: CC1G_06067-t26_1-p1

You are here: Home > Sequence: CC1G_06067-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_06067-t26_1-p1
CAZy Family GH125
CAZyme Description alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
304 AACS02000002|CGC18 32869.76 10.1229
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.26:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 85 300 1.6e-76 0.9907834101382489

CDD Domains      help

CC1G_06067-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.66e-67 22 303 111 396
1.25e-63 17 303 2 293
1.06e-62 48 303 154 408
1.66e-62 47 303 258 498
2.33e-62 47 303 258 498

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.24e-35 129 300 97 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]
4.86e-13 73 300 25 240
Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2]

Swiss-Prot Hits      help

CC1G_06067-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000213 0.999740 CS pos: 20-21. Pr: 0.9815

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_06067-t26_1-p1.