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CAZyme Information: CC1G_06060-t26_1-p1

You are here: Home > Sequence: CC1G_06060-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_06060-t26_1-p1
CAZy Family GH12
CAZyme Description alginate lyase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
506 AACS02000002|CGC15 52687.60 4.9633
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_06060-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 116 307 4.4e-39 0.765

CDD Domains      help

CC1G_06060-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.07e-73 110 506 80 452
9.98e-72 102 506 215 613
1.95e-71 102 506 215 613
3.80e-70 107 506 221 611
4.16e-53 117 505 173 513

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.22e-26 108 288 50 209
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

CC1G_06060-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000067 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_06060-t26_1-p1.