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CAZyme Information: CC1G_05213-t26_1-p1

You are here: Home > Sequence: CC1G_05213-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_05213-t26_1-p1
CAZy Family CE4
CAZyme Description glycosyl hydrolase family 88
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
417 45859.41 9.1108
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_05213-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 50 334 7.1e-16 0.7469879518072289

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400034 Glyco_hydro_88 2.54e-10 53 379 29 295
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
226678 YesR 5.77e-10 131 404 97 347
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.02e-92 35 415 29 375
5.33e-92 35 415 34 380
1.79e-91 35 412 107 450
2.26e-91 35 415 34 380
2.87e-88 35 415 29 375

PDB Hits      help

CC1G_05213-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

CC1G_05213-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.414072 0.585923 CS pos: 23-24. Pr: 0.3207

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_05213-t26_1-p1.