logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CC1G_05212-t26_1-p1

You are here: Home > Sequence: CC1G_05212-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_05212-t26_1-p1
CAZy Family CE4
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
445 AACS02000011|CGC2 48489.61 7.1420
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_05212-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 48 391 5e-27 0.9608433734939759

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226678 YesR 2.14e-19 52 389 36 347
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
400034 Glyco_hydro_88 3.28e-16 52 389 29 337
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.25e-99 34 397 107 450
1.71e-98 34 400 34 380
2.58e-98 34 410 29 384
5.29e-98 34 421 29 393
5.77e-96 34 400 34 380

PDB Hits      help

CC1G_05212-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

CC1G_05212-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999857 0.000183

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_05212-t26_1-p1.