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CAZyme Information: CC1G_04177-t26_1-p1

You are here: Home > Sequence: CC1G_04177-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_04177-t26_1-p1
CAZy Family CBM21|GH13
CAZyme Description xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
234 AACS02000004|CGC6 26093.90 6.8351
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:61

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 50 230 2.9e-51 0.9830508474576272

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 1.52e-82 50 230 1 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.28e-84 1 233 1 229
6.65e-74 1 233 1 225
2.23e-72 32 233 13 215
4.45e-71 40 233 37 232
1.81e-69 38 233 31 228

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.68e-64 42 233 3 190
Chain A, Protein (endo-1,4-beta-xylanase) [Paecilomyces variotii]
3.54e-62 42 233 3 190
ENDO-1,4-BETA-XYLANASE, ROOM TEMPERATURE, PH 4.0 [Thermomyces lanuginosus]
2.40e-56 47 233 7 188
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei]
3.29e-56 47 233 6 187
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei]
3.39e-56 47 233 7 188
Crystal Structures of Mutant Endo-beta-1,4-xylanase(Y77F) [Trichoderma reesei RUT C-30],5ZKZ_A Crystal Structures of Mutant Endo-beta-1,4-xylanase II(Y77F) Complexed with Xylotriose [Trichoderma reesei RUT C-30]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.75e-67 41 233 2 196
Endo-1,4-beta-xylanase A OS=Schizophyllum commune OX=5334 GN=XYNA PE=1 SV=1
6.04e-64 41 233 39 233
Endo-1,4-beta-xylanase 1 OS=Leucoagaricus gongylophorus OX=79220 GN=Xyn1 PE=1 SV=1
1.38e-63 42 233 3 190
Endo-1,4-beta-xylanase OS=Byssochlamys spectabilis OX=264951 PE=1 SV=1
2.22e-63 38 233 40 229
Endo-1,4-beta-xylanase 4 OS=Magnaporthe grisea OX=148305 GN=XYL4 PE=3 SV=2
2.22e-63 38 233 40 229
Endo-1,4-beta-xylanase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=XYL4 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000258 0.999736 CS pos: 17-18. Pr: 0.9780

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_04177-t26_1-p1.