logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CC1G_01548-t26_1-p1

You are here: Home > Sequence: CC1G_01548-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_01548-t26_1-p1
CAZy Family AA3
CAZyme Description pyranose dehydrogenase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
580 62277.29 4.5635
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CC1G_01548-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 33 578 1.7e-151 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 1.42e-106 30 576 2 532
choline dehydrogenase; Validated
225186 BetA 2.65e-105 33 578 7 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 8.02e-34 433 571 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 2.54e-33 106 346 15 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 1.06e-24 31 551 53 552
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.98e-138 7 580 13 600
3.14e-132 7 580 13 602
3.14e-132 7 580 13 602
3.24e-132 17 577 18 599
4.78e-132 24 578 21 592

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.09e-133 7 580 13 602
Crystal structure of pyranose dehydrogenase from Agaricus meleagris, wildtype [Leucoagaricus meleagris]
1.25e-131 33 578 1 564
Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii]
2.03e-130 33 578 2 565
Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii]
2.43e-60 33 578 6 572
Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_B Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_C Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40]
3.37e-60 33 578 6 572
Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_B Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_C Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.29e-139 7 580 13 600
Pyranose dehydrogenase 3 OS=Leucoagaricus meleagris OX=201219 GN=pdh3 PE=2 SV=1
5.58e-133 7 580 13 602
Pyranose dehydrogenase 1 OS=Leucoagaricus meleagris OX=201219 GN=pdh1 PE=1 SV=1
2.95e-132 8 579 16 599
Pyranose dehydrogenase OS=Agaricus xanthodermus OX=83518 GN=pdh1 PE=1 SV=1
1.26e-129 22 580 25 595
Pyranose dehydrogenase OS=Agaricus campestris OX=56157 GN=pdh1 PE=1 SV=1
5.81e-129 16 580 22 600
Pyranose dehydrogenase 2 OS=Leucoagaricus meleagris OX=201219 GN=pdh2 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.631616 0.368379

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_01548-t26_1-p1.