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CAZyme Information: CC1G_01516-t26_1-p1

You are here: Home > Sequence: CC1G_01516-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Coprinopsis cinerea
Lineage Basidiomycota; Agaricomycetes; ; Psathyrellaceae; Coprinopsis; Coprinopsis cinerea
CAZyme ID CC1G_01516-t26_1-p1
CAZy Family AA3
CAZyme Description xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
496 53625.10 7.2660
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Ccinereaokay7-130 13657 240176 301 13356
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 21 458 3.9e-174 0.9932279909706546

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 3.56e-26 24 457 36 425
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
396577 Glyco_hydro_59 2.11e-12 36 373 2 283
Glycosyl hydrolase family 59.
405300 Glyco_hydr_30_2 1.62e-05 24 231 4 220
O-Glycosyl hydrolase family 30.
407314 Glyco_hydro_30C 3.35e-05 372 458 1 63
Glycosyl hydrolase family 30 beta sandwich domain.
307945 Glyco_hydro_30 1.19e-04 68 197 33 158
Glycosyl hydrolase family 30 TIM-barrel domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.88e-164 20 461 19 459
4.08e-164 18 461 17 459
5.37e-163 20 461 23 463
7.35e-162 20 461 18 458
7.61e-162 9 461 8 459

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5.97e-135 24 461 25 454
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
1.20e-125 20 464 1 451
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6.25e-125 13 464 1 458
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
2.26e-105 23 404 23 412
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
1.79e-104 23 404 94 483
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.72e-125 20 464 25 475
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
1.96e-08 16 462 28 422
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
2.14e-07 33 197 76 244
Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum OX=5544 PE=1 SV=1
5.49e-06 115 436 98 396
Glucuronoxylanase XynC OS=Bacillus subtilis OX=1423 GN=xynC PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000213 0.999770 CS pos: 20-21. Pr: 0.9801

TMHMM  Annotations      help

There is no transmembrane helices in CC1G_01516-t26_1-p1.