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CAZyme Information: CAP99317:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP99317:RNA-p1 | |||||||||||
| CAZy Family | GT62 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.15:80 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 46 | 365 | 2.7e-75 | 0.9815384615384616 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 395231 | Glyco_hydro_28 | 2.55e-149 | 53 | 369 | 3 | 321 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| 177865 | PLN02218 | 5.96e-25 | 88 | 363 | 143 | 420 | polygalacturonase ADPG |
| 227721 | Pgu1 | 1.25e-23 | 94 | 296 | 191 | 408 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| 215426 | PLN02793 | 1.76e-21 | 108 | 343 | 148 | 380 | Probable polygalacturonase |
| 178580 | PLN03003 | 1.85e-20 | 91 | 301 | 99 | 304 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.53e-263 | 1 | 369 | 1 | 369 | |
| 3.30e-200 | 1 | 369 | 1 | 370 | |
| 1.99e-198 | 1 | 369 | 1 | 367 | |
| 1.99e-198 | 1 | 369 | 1 | 367 | |
| 1.99e-198 | 1 | 369 | 1 | 367 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.95e-172 | 36 | 369 | 11 | 344 | Chain A, endo-polygalacturonase [Evansstolkia leycettana] |
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| 1.20e-171 | 36 | 369 | 11 | 344 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 4.22e-170 | 34 | 369 | 1 | 336 | Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger] |
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| 4.22e-170 | 36 | 369 | 3 | 336 | Chain A, Endo-polygalacturonase [Evansstolkia leycettana] |
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| 7.90e-157 | 36 | 365 | 3 | 333 | Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5.87e-201 | 1 | 369 | 1 | 370 | Polygalacturonase 1 OS=Penicillium olsonii OX=99116 GN=PG1 PE=3 SV=1 |
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| 3.53e-199 | 1 | 369 | 1 | 367 | Polygalacturonase OS=Penicillium digitatum OX=36651 GN=PG1 PE=3 SV=1 |
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| 9.51e-184 | 11 | 369 | 13 | 371 | Polygalacturonase OS=Penicillium janthinellum OX=5079 PE=3 SV=1 |
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| 6.28e-179 | 6 | 369 | 7 | 368 | Probable endopolygalacturonase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaA PE=3 SV=1 |
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| 8.46e-177 | 1 | 369 | 1 | 368 | Probable endopolygalacturonase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000288 | 0.999711 | CS pos: 18-19. Pr: 0.9604 |