CAZyme Information: CAP98234:RNA-p1

Basic Information

• Species: Penicillium rubens
• Lineage: Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
• CAZyme ID: CAP98234:RNA-p1
• CAZy Family: GT31
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
582	Pc00c22|CGC3	63346.65	4.4772

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255	14021	500485	1464	12557

• Gene Location: location=Pc00c22:2261190-2262935(+)

Full Sequence      

MILSYIFGLLVATSGLAKAVNITGYEYVVVGSGAGGGPLAARLALAGHKTLLLEAGDDQG
ENYNYTIPAYSARASEDEKLAWNFFVRHYEDDERQARDWKASYDTPDGGIYTGLNPPEGS
TLKGTLYPRTGTLGGCTAHNALIAVYPHQSDFEYIETITGDNSWTPDNMRKYYAKLENNG
YSLPAVKGHGYDGWLSTETAPLSIVLKDTQLLSMLTGGALALGNLTDHLMNIGTLLLGDA
NADKKSRDTEPGYYQIPIATDDAHRNGPREFIIAVRDAKNDDGSKKYPLDVRMNTHVTKV
TFDETENPPRATGVEFLEGEHLYKASPMSKSALPGTPGSASASREVIVSGGVYNSPQILK
LSGVGPAEELKKFGIKVIKDLPGVGTNLQDHYEISVQGKIEEDFSCLDKCTFSIRGQDDP
CIDDWESPILGDRGIYSSPGLAATMLYKSSTAGDDFDIFEFGGPVNFRGYFPDYSINATD
EHNWFTWAILKAHPRNTAGTVLLQSADPLDMPEITFNYFDTGVGDYDADLTALYEAIELG
RDAFKRQLVNITEVLPGADVQSEGDIKDYVKDGAWGHPCLPA

Enzyme Prediction     

No EC number prediction in CAP98234:RNA-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	24	573	9.6e-68	0.8767605633802817

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
235000	PRK02106	4.21e-38	289	579	216	475	choline dehydrogenase; Validated
225186	BetA	1.85e-37	33	579	16	476	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
215420	PLN02785	9.74e-12	289	390	235	326	Protein HOTHEAD
366272	GMC_oxred_N	8.98e-11	289	393	142	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS21087.1|AA3	0.0	1	577	1	578
EAA61171.1|AA3	0.0	1	577	1	578
QMW33146.1|AA3	0.0	1	577	1	580
QRD84722.1|AA3	0.0	1	577	1	580
QMW45179.1|AA3	0.0	1	577	1	580

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YS2_AAA	1.86e-22	25	571	8	492	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
6YRU_AAA	2.47e-22	25	571	8	492	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6ZH7_A	2.47e-22	25	571	8	492	Chain A, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis],6ZH7_B Chain B, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis]
6YS1_AAA	2.47e-22	25	571	8	492	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]
5NCC_A	2.62e-22	25	571	24	508	Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_B Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_C Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_D Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_E Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis],5NCC_F Structure of Fatty acid Photodecarboxylase in complex with FAD and palmitic acid [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5HL11|BETA_STAEQ	1.02e-29	25	582	8	482	Oxygen-dependent choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=betA PE=3 SV=1
sp|Q8CMY2|BETA_STAES	1.02e-29	25	582	8	482	Oxygen-dependent choline dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=betA PE=3 SV=1
sp|B2K8U4|BETA_YERPB	3.59e-27	25	574	3	468	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=betA PE=3 SV=1
sp|Q66D54|BETA_YERPS	3.59e-27	25	574	3	468	Oxygen-dependent choline dehydrogenase OS=Yersinia pseudotuberculosis serotype I (strain IP32953) OX=273123 GN=betA PE=3 SV=1
sp|Q1CFR7|BETA_YERPN	6.46e-27	25	574	3	468	Oxygen-dependent choline dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=betA PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000671	0.999311	CS pos: 19-20. Pr: 0.9601

TMHMM  Annotations     

There is no transmembrane helices in CAP98234:RNA-p1.