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CAZyme Information: CAP97267:RNA-p1

You are here: Home > Sequence: CAP97267:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP97267:RNA-p1
CAZy Family GT15
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
750 81269.10 7.0046
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CAP97267:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 217 733 3.3e-62 0.9671532846715328

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
366272 GMC_oxred_N 1.51e-60 270 494 4 218
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
225186 BetA 3.88e-39 221 736 9 536
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 2.52e-34 573 726 1 140
GMC oxidoreductase. This domain found associated with pfam00732.
235000 PRK02106 2.42e-08 674 730 473 528
choline dehydrogenase; Validated
224154 COG1233 3.79e-06 219 263 3 56
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.44e-200 1 747 4 744
9.75e-14 221 745 252 796
4.19e-11 213 733 264 805
6.85e-11 221 730 245 777
1.18e-10 221 733 255 786

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.02e-09 221 738 4 539
Chain A, Cellobiose dehydrogenase [Phanerodontia chrysosporium],1NAA_B Chain B, Cellobiose dehydrogenase [Phanerodontia chrysosporium]
1.02e-09 221 738 9 544
Chain A, cellobiose dehydrogenase [Phanerodontia chrysosporium],1KDG_B Chain B, cellobiose dehydrogenase [Phanerodontia chrysosporium]
5.58e-09 460 730 269 561
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
8.88e-09 215 733 225 763
Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A],4QI7_B Cellobiose dehydrogenase from Neurospora crassa, NcCDH [Neurospora crassa OR74A]
1.54e-08 221 731 3 502
Crystal structure of pyridoxine 4-oxidase - pyridoxamine complex [Mesorhizobium loti]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.23e-91 218 737 237 746
Long-chain-alcohol oxidase FAO2 OS=Lotus japonicus OX=34305 GN=FAO2 PE=2 SV=1
3.77e-82 218 739 231 742
Long-chain-alcohol oxidase FAO3 OS=Arabidopsis thaliana OX=3702 GN=FAO3 PE=1 SV=1
4.85e-81 218 726 222 711
Long-chain-alcohol oxidase FAO4A OS=Arabidopsis thaliana OX=3702 GN=FAO4A PE=3 SV=2
1.07e-80 218 726 235 733
Long-chain-alcohol oxidase FAO1 OS=Lotus japonicus OX=34305 GN=FAO1 PE=1 SV=1
7.48e-80 212 726 230 731
Long-chain-alcohol oxidase FAO4B OS=Arabidopsis thaliana OX=3702 GN=FAO4B PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.998219 0.001817

TMHMM  Annotations      help

There is no transmembrane helices in CAP97267:RNA-p1.