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CAZyme Information: CAP97008:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP97008:RNA-p1 | |||||||||||
| CAZy Family | GH93 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 71 | 624 | 4.3e-150 | 0.9876760563380281 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 1.19e-125 | 71 | 623 | 9 | 532 | choline dehydrogenase; Validated |
| 225186 | BetA | 1.96e-114 | 71 | 631 | 11 | 541 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 274888 | Rv0697 | 8.28e-49 | 71 | 623 | 4 | 487 | dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. |
| 398739 | GMC_oxred_C | 8.76e-40 | 466 | 618 | 1 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 366272 | GMC_oxred_N | 1.26e-34 | 138 | 357 | 17 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.80e-291 | 71 | 636 | 41 | 628 | |
| 5.80e-291 | 71 | 636 | 41 | 628 | |
| 1.17e-290 | 71 | 636 | 41 | 628 | |
| 1.17e-290 | 71 | 636 | 41 | 628 | |
| 1.76e-290 | 67 | 636 | 34 | 620 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.55e-71 | 66 | 626 | 1 | 566 | Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii] |
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| 2.11e-71 | 71 | 626 | 5 | 565 | Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii] |
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| 2.97e-67 | 63 | 622 | 3 | 560 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 5.74e-67 | 63 | 622 | 3 | 560 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
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| 5.74e-67 | 63 | 622 | 3 | 560 | Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRV_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRX_AAA Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis],6YRZ_AAA Chain AAA, Fatty acid photodecarboxylase, chloroplastic [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 9.34e-129 | 71 | 623 | 39 | 612 | Dehydrogenase str4 OS=Strobilurus tenacellus OX=41251 GN=str4 PE=1 SV=1 |
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| 1.81e-89 | 71 | 623 | 8 | 527 | Uncharacterized GMC-type oxidoreductase Mb1310 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB1310 PE=3 SV=1 |
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| 1.81e-89 | 71 | 623 | 8 | 527 | Uncharacterized GMC-type oxidoreductase Rv1279 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv1279 PE=1 SV=1 |
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| 1.81e-89 | 71 | 623 | 8 | 527 | Uncharacterized GMC-type oxidoreductase MT1316 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1316 PE=3 SV=1 |
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| 4.57e-79 | 44 | 623 | 21 | 574 | Choline dehydrogenase, mitochondrial OS=Mus musculus OX=10090 GN=Chdh PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 1.000044 | 0.000000 |