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CAZyme Information: CAP94621:RNA-p1

You are here: Home > Sequence: CAP94621:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP94621:RNA-p1
CAZy Family GH43
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
573 63947.98 4.8709
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in CAP94621:RNA-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH76 146 520 1.5e-57 0.7681564245810056

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
397638 Glyco_hydro_76 2.72e-11 224 432 120 288
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 573 1 573
0.0 22 572 1 551
5.11e-232 22 570 10 614
5.11e-232 22 570 10 614
1.27e-231 32 570 6 600

PDB Hits      help

CAP94621:RNA-p1 has no PDB hit.

Swiss-Prot Hits      help

CAP94621:RNA-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000488 0.999492 CS pos: 36-37. Pr: 0.8632

TMHMM  Annotations      help

There is no transmembrane helices in CAP94621:RNA-p1.