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CAZyme Information: CAP93377:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP93377:RNA-p1 | |||||||||||
| CAZy Family | GH31 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 9 | 574 | 6.3e-149 | 0.9947183098591549 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 235000 | PRK02106 | 1.92e-88 | 9 | 589 | 5 | 546 | choline dehydrogenase; Validated |
| 225186 | BetA | 1.11e-86 | 7 | 577 | 5 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 398739 | GMC_oxred_C | 4.46e-42 | 430 | 567 | 1 | 142 | GMC oxidoreductase. This domain found associated with pfam00732. |
| 366272 | GMC_oxred_N | 7.59e-24 | 89 | 313 | 23 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 215420 | PLN02785 | 2.88e-23 | 8 | 565 | 54 | 569 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 593 | 1 | 593 | |
| 0.0 | 1 | 593 | 1 | 593 | |
| 0.0 | 1 | 593 | 1 | 593 | |
| 0.0 | 1 | 593 | 1 | 593 | |
| 0.0 | 1 | 593 | 1 | 593 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2.49e-307 | 5 | 580 | 2 | 577 | Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_B Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40],3Q9T_C Crystal structure analysis of formate oxidase [Aspergillus oryzae RIB40] |
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| 7.13e-307 | 5 | 580 | 2 | 577 | Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_B Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU3_C Effect of mutation (R554K) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40] |
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| 2.04e-306 | 5 | 580 | 2 | 577 | Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_B Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40],5ZU2_C Effect of mutation (R554A) on FAD modification in Aspergillus oryzae RIB40formate oxidase [Aspergillus oryzae RIB40] |
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| 1.45e-73 | 9 | 575 | 1 | 564 | Crystal structure of aryl-alcohol oxidase from Pleurotus eryngii in complex with p-anisic acid [Pleurotus eryngii] |
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| 5.63e-73 | 8 | 575 | 1 | 565 | Crystal structure of aryl-alcohol-oxidase from Pleurotus eryingii [Pleurotus eryngii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.32e-60 | 9 | 591 | 5 | 549 | Oxygen-dependent choline dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=betA PE=3 SV=1 |
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| 2.51e-59 | 9 | 572 | 2 | 525 | Oxygen-dependent choline dehydrogenase OS=Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37) OX=439375 GN=betA PE=3 SV=1 |
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| 3.49e-58 | 9 | 591 | 5 | 549 | Oxygen-dependent choline dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) OX=398577 GN=betA PE=3 SV=1 |
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| 3.49e-58 | 9 | 591 | 5 | 549 | Oxygen-dependent choline dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) OX=339670 GN=betA PE=3 SV=1 |
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| 6.58e-58 | 9 | 591 | 5 | 549 | Oxygen-dependent choline dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) OX=320372 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.999408 | 0.000626 |