logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: CAP93360:RNA-p1

You are here: Home > Sequence: CAP93360:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP93360:RNA-p1
CAZy Family GH31
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
636 Pc00c16|CGC10 71523.34 5.9584
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.31:89

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 41 632 1.1e-105 0.6236702127659575

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
236657 PRK10150 0.0 40 634 2 597
beta-D-glucuronidase; Provisional
225789 LacZ 1.75e-124 42 631 6 597
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
397119 Glyco_hydro_2_C 1.89e-105 317 632 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
236673 ebgA 9.82e-41 107 594 113 547
cryptic beta-D-galactosidase subunit alpha; Reviewed
236548 lacZ 4.62e-25 208 497 208 500
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 636 1 636
0.0 1 631 1 630
0.0 1 632 1 631
0.0 1 634 1 638
0.0 1 632 1 632

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 40 632 35 625
The structure of Aspergillus oryzae a-glucuronidase complexed with glycyrrhetinic acid monoglucuronide [Aspergillus oryzae],5C71_B The structure of Aspergillus oryzae a-glucuronidase complexed with glycyrrhetinic acid monoglucuronide [Aspergillus oryzae],5C71_C The structure of Aspergillus oryzae a-glucuronidase complexed with glycyrrhetinic acid monoglucuronide [Aspergillus oryzae],5C71_D The structure of Aspergillus oryzae a-glucuronidase complexed with glycyrrhetinic acid monoglucuronide [Aspergillus oryzae]
0.0 40 632 10 600
The structure of Aspergillus oryzae beta-glucuronidase [Aspergillus oryzae],5C70_B The structure of Aspergillus oryzae beta-glucuronidase [Aspergillus oryzae]
3.11e-229 40 632 2 591
Chain B, Beta-D-glucuronidase [Escherichia coli]
3.22e-229 40 632 3 592
Chain A, Beta-D-glucuronidase [Escherichia coli],6LEG_B Chain B, Beta-D-glucuronidase [Escherichia coli],6LEG_C Chain C, Beta-D-glucuronidase [Escherichia coli],6LEG_D Chain D, Beta-D-glucuronidase [Escherichia coli],6LEL_A Chain A, Beta-D-glucuronidase [Escherichia coli],6LEL_B Chain B, Beta-D-glucuronidase [Escherichia coli]
3.34e-229 40 632 4 593
Crystal structure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K46_B Crystal structure of full-length E. coli beta-glucuronidase [Escherichia coli K-12],3K4D_A Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],3K4D_B Crystal structure of E. coli beta-glucuronidase with the glucaro-d-lactam inhibitor bound [Escherichia coli K-12],6LEM_A Chain A, Beta-D-glucuronidase [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.60e-228 40 632 2 591
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
5.96e-169 40 632 28 625
Beta-glucuronidase OS=Rattus norvegicus OX=10116 GN=Gusb PE=1 SV=1
9.27e-169 40 632 28 629
Beta-glucuronidase OS=Homo sapiens OX=9606 GN=GUSB PE=1 SV=2
1.85e-168 40 632 28 629
Beta-glucuronidase OS=Pongo abelii OX=9601 GN=GUSB PE=2 SV=2
1.35e-167 40 632 28 625
Beta-glucuronidase OS=Mus musculus OX=10090 GN=Gusb PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000296 0.999699 CS pos: 18-19. Pr: 0.9820

TMHMM  Annotations      help

There is no transmembrane helices in CAP93360:RNA-p1.