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CAZyme Information: CAP93233:RNA-p1

You are here: Home > Sequence: CAP93233:RNA-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Penicillium rubens
Lineage Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens
CAZyme ID CAP93233:RNA-p1
CAZy Family GH3
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
391 41018.73 4.5130
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_PrubensWisconsin54-1255 14021 500485 1464 12557
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.91:55 3.2.1.4:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH6 58 352 2e-93 0.9421768707482994

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396075 Glyco_hydro_6 1.46e-163 75 355 15 293
Glycosyl hydrolases family 6.
227616 CelA1 1.73e-47 26 391 14 443
Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.00e-269 1 391 1 391
7.27e-238 1 391 1 391
1.02e-207 30 390 95 458
2.00e-207 30 391 38 400
3.58e-207 30 390 91 454

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.36e-184 34 390 1 356
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens]
4.76e-184 34 390 1 356
Crystal structure of a fungal chimeric cellobiohydrolase Cel6A [Humicola insolens]
1.52e-182 30 390 2 361
Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK0_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QK2_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]
1.63e-182 30 390 4 363
Chain A, CELLOBIOHYDROLASE II CORE PROTEIN [Trichoderma reesei]
6.63e-182 30 390 4 363
Chain A, CELLOBIOHYDROLASE II [Trichoderma reesei],1CB2_B Chain B, CELLOBIOHYDROLASE II [Trichoderma reesei],1QJW_A Chain A, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei],1QJW_B Chain B, CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) [Trichoderma reesei]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.07e-209 30 390 107 467
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cbhC PE=3 SV=1
1.81e-208 30 390 95 458
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1
6.36e-208 30 390 91 454
1,4-beta-D-glucan cellobiohydrolase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cbhC PE=1 SV=2
7.55e-208 33 390 92 449
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=cbhC PE=3 SV=1
2.36e-205 33 390 96 453
Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=cbhC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.042957 0.957004 CS pos: 17-18. Pr: 0.8614

TMHMM  Annotations      help

There is no transmembrane helices in CAP93233:RNA-p1.