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CAZyme Information: CAP93133:RNA-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Penicillium rubens | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Eurotiomycetes; ; Aspergillaceae; Penicillium; Penicillium rubens | |||||||||||
| CAZyme ID | CAP93133:RNA-p1 | |||||||||||
| CAZy Family | GH3 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 42 | 379 | 9.8e-99 | 0.579225352112676 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 366272 | GMC_oxred_N | 3.03e-47 | 109 | 359 | 13 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| 235000 | PRK02106 | 1.31e-45 | 44 | 356 | 7 | 298 | choline dehydrogenase; Validated |
| 225186 | BetA | 1.86e-40 | 39 | 371 | 4 | 317 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| 215420 | PLN02785 | 2.33e-06 | 42 | 367 | 55 | 337 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 5.61e-219 | 1 | 440 | 1 | 436 | |
| 5.61e-219 | 1 | 440 | 1 | 436 | |
| 1.60e-218 | 1 | 440 | 1 | 436 | |
| 4.55e-218 | 1 | 440 | 1 | 436 | |
| 6.25e-213 | 5 | 434 | 6 | 426 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.86e-208 | 27 | 440 | 4 | 413 | GLUCOSE OXIDASE FROM APERGILLUS NIGER [Aspergillus niger],1GAL_A CRYSTAL STRUCTURE OF GLUCOSE OXIDASE FROM ASPERGILLUS NIGER: REFINED AT 2.3 ANGSTROMS RESOLUTION [Aspergillus niger],3QVP_A Crystal structure of glucose oxidase for space group C2221 at 1.2 A resolution [Aspergillus niger],3QVR_A Crystal structure of glucose oxidase for space group P3121 at 1.3 A resolution. [Aspergillus niger] |
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| 9.10e-208 | 27 | 440 | 2 | 411 | Glucose oxydase mutant A2 [Aspergillus niger] |
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| 3.67e-207 | 27 | 440 | 2 | 411 | Glucose oxidase mutant A2 [Aspergillus niger] |
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| 3.41e-204 | 19 | 436 | 1 | 412 | Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense],1GPE_B Glucose Oxidase From Penicillium Amagasakiense [Penicillium amagasakiense] |
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| 3.83e-61 | 29 | 429 | 3 | 403 | Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4.62e-208 | 1 | 440 | 1 | 435 | Glucose oxidase OS=Aspergillus niger OX=5061 GN=gox PE=1 SV=1 |
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| 2.46e-205 | 1 | 436 | 1 | 430 | Glucose oxidase OS=Talaromyces flavus OX=5095 GN=GOX PE=3 SV=1 |
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| 1.75e-203 | 19 | 436 | 1 | 412 | Glucose oxidase OS=Penicillium amagasakiense OX=63559 PE=1 SV=1 |
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| 1.29e-40 | 40 | 367 | 44 | 371 | GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1 |
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| 1.29e-40 | 40 | 367 | 44 | 371 | GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000945 | 0.999012 | CS pos: 16-17. Pr: 0.8066 |